chr3 : 112,566,578 112,566,873
295 bp 8 TFs 2 linked genes
This 295 bp open chromatin element is linked to SLC35A5 and ATG3 and is bound by 8 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
SLC35A5 4.5 kb Proximal Proximity
ATG3 4.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:112,561,578 – 112,571,873
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
8 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 155 bp overlap
FOXA2 2 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 295 bp overlap
ChIP DE DE-FOXA2-2 253 bp overlap
GATA3 1 dataset
ChIP SK-N-SH ENCFF040SSB 116 bp overlap
GATA4 5 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 239 bp overlap
ChIP DE DE-GATA4-1 295 bp overlap
ChIP DE DE-GATA4-2 295 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 295 bp overlap
ChIP YCC-3 GSE51705.GATA4.YCC-3 295 bp overlap
GATA6 6 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 247 bp overlap
ChIP DE DE-GATA6-1 295 bp overlap
ChIP DE DE-GATA6-2 295 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 295 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 295 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 295 bp overlap
PRDM1 1 dataset
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 65 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 251 bp overlap
TRPS1 1 dataset
ChIP MCF-7 GSE133072.TRPS1.MCF-7 165 bp overlap