chr3 : 66,506,693 66,507,165
472 bp 9 TFs 1 linked gene
This 472 bp open chromatin element is linked to LRIG1 and is bound by 9 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LRIG1 5.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:66,501,693 – 66,512,165
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
9 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 177 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 389 bp overlap
ChIP DE DE-FOXA2-2 390 bp overlap
GATA4 5 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 175 bp overlap
ChIP DE DE-GATA4-1 411 bp overlap
ChIP DE DE-GATA4-2 403 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 261 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 260 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 365 bp overlap
ChIP DE DE-GATA6-2 342 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 401 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 437 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 355 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 412 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 444 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 394 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 384 bp overlap
MYB 1 dataset
ChIP MOLT-3 GSE59657.MYB.MOLT-3 139 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 149 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 177 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 418 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 407 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 322 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 205 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 373 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 472 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 411 bp overlap