chr3 : 52,839,389 52,839,621
232 bp 11 TFs 1 linked gene
This 232 bp open chromatin element is linked to ENSG00000243696 and is bound by 11 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000243696 3.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:52,834,389 – 52,844,621
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
11 transcription factors
Source
Cell type
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 138 bp overlap
DNMT3B 1 dataset
ChIP HUES-8 GSE99346.DNMT3B.HUES-8 214 bp overlap
ESR1 5 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 194 bp overlap
ChIP MCF-7_MRNAHIST ERP002305.ESR1.MCF-7_MRNAHIST 92 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 189 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 200 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 56 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 232 bp overlap
ChIP DE DE-FOXA2-2 232 bp overlap
GATA3 3 datasets
ChIP T-47D ENCSR000BMX.GATA3.T-47D 198 bp overlap
ChIP T-47D_sc GSE122847.GATA3.T-47D_sc 116 bp overlap
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 232 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-2 232 bp overlap
ChIP foregut GSE117136.GATA4.foregut 232 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 232 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 232 bp overlap
SUZ12 1 dataset
ChIP LNCaP GSE39459.SUZ12.LNCaP 82 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 183 bp overlap
TEAD4 1 dataset
ChIP T-47D_Veh GSE125594.TEAD4.T-47D_Veh 219 bp overlap
YY1AP1 1 dataset
ChIP T-47D_Veh GSE125594.YY1AP1.T-47D_Veh 196 bp overlap