chr3 : 24,525,844 24,526,431
587 bp 16 TFs 2 linked genes
This 587 bp open chromatin element is linked to ENSG00000272554 and ENSG00000265028 and is bound by 16 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000272554 3.4 kb Proximal Proximity
ENSG00000265028 4.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:24,520,844 – 24,531,431
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
ADNP 1 dataset
ChIP K562 ENCFF492SKF 341 bp overlap
BCOR 1 dataset
ChIP K-562 ENCSR808AKZ.BCOR.K-562 80 bp overlap
FOXA1 1 dataset
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 54 bp overlap
KDM1A 3 datasets
ChIP HepG2 ENCFF240UWG 232 bp overlap
ChIP K562 ENCFF128TYE 132 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 111 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 522 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 242 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 181 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 240 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 297 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 317 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 362 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 91 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 386 bp overlap
ZMYM3 2 datasets
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 88 bp overlap
ChIP K562 ENCFF361LXT 83 bp overlap
ZNF629 2 datasets
ChIP Hep-G2 ENCSR363ASY.ZNF629.Hep-G2 71 bp overlap
ChIP HepG2 ENCFF490FFQ 83 bp overlap