chr3 : 10,989,698 10,990,161
463 bp 11 TFs 1 linked gene
This 463 bp open chromatin element is linked to SLC6A1 and is bound by 11 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SLC6A1 2.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:10,984,698 – 10,995,161
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
11 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 210 bp overlap
EZH2 6 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 422 bp overlap
ChIP A-673 ENCSR179SAO.EZH2.A-673 176 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 332 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 57 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 259 bp overlap
ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 80 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 333 bp overlap
ChIP DE DE-FOXA2-2 359 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 426 bp overlap
ChIP DE DE-GATA4-2 463 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 331 bp overlap
ChIP DE DE-GATA6-2 463 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 151 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 323 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 220 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 147 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 463 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 221 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 155 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 264 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 247 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 463 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 249 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 227 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 458 bp overlap
SUZ12 1 dataset
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 463 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 203 bp overlap