chr1 : 53,329,840 53,330,203
363 bp 17 TFs 2 linked genes
This 363 bp open chromatin element is linked to LRP8-DT and LRP8 and is bound by 17 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
LRP8-DT 1.6 kb Proximal Proximity
LRP8 1.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:53,324,840 – 53,335,203
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 197 bp overlap
ChIP K562 ENCFF673OEZ 363 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 173 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 296 bp overlap
GATA1 3 datasets
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 145 bp overlap
ChIP K562 ENCFF094CMK 225 bp overlap
ChIP erythroid-progenitor_EPrec GSE124163.GATA1.erythroid-progenitor_EPrec 144 bp overlap
GATA4 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 175 bp overlap
ChIP DE DE-GATA4-1 363 bp overlap
ChIP DE DE-GATA4-2 363 bp overlap
ChIP foregut GSE117136.GATA4.foregut 356 bp overlap
GATA6 15 datasets
ChIP AGS GSE51705.GATA6.AGS 303 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 170 bp overlap
ChIP DE DE-GATA6-1 329 bp overlap
ChIP DE DE-GATA6-2 363 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 326 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 363 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 363 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 363 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 363 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 363 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 363 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 363 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 363 bp overlap
ChIP foregut GSE117136.GATA6.foregut 363 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 269 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 194 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 311 bp overlap
ChIP K562 ENCFF348IBL 269 bp overlap
KDM1A 1 dataset
ChIP K562 ENCFF133OLU 290 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 286 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 363 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 349 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 250 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 363 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 148 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 117 bp overlap