chr2 : 215,276,441 215,276,949
508 bp 15 TFs 1 linked gene
This 508 bp open chromatin element is linked to LINC02862 and is bound by 15 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC02862 1.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:215,271,441 – 215,281,949
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
15 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_DMSO GSE83860.AR.LNCaP_DMSO 128 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 202 bp overlap
FOXA1 15 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 220 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 305 bp overlap
ChIP 22Rv1_CST_Crispr GSE123618.FOXA1.22Rv1_CST_Crispr 146 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 252 bp overlap
ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 266 bp overlap
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 289 bp overlap
ChIP HEK293_i176m_TFS GSE123618.FOXA1.HEK293_i176m_TFS 224 bp overlap
ChIP HEK293_r261g_TFS GSE123618.FOXA1.HEK293_r261g_TFS 310 bp overlap
ChIP LAPC-4_CST_DHT GSE123618.FOXA1.LAPC-4_CST_DHT 193 bp overlap
ChIP LNCaP GSE64656.FOXA1.LNCaP 272 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 188 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 282 bp overlap
ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 230 bp overlap
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 242 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 182 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 153 bp overlap
ChIP DE DE-FOXA2-1 496 bp overlap
ChIP DE DE-FOXA2-2 480 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 508 bp overlap
ChIP DE DE-GATA4-2 508 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 508 bp overlap
ChIP DE DE-GATA6-2 508 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 266 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 431 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 508 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 440 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 457 bp overlap
HOXB13 1 dataset
ChIP LNCaP GSE56288.HOXB13.LNCaP 237 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 464 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 468 bp overlap
PHIP 2 datasets
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 219 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 101 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 461 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 386 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 497 bp overlap