chr2 : 209,994,084 209,994,343
259 bp 16 TFs 1 linked gene
This 259 bp open chromatin element is linked to RPE and is bound by 16 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RPE 8.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:209,989,084 – 209,999,343
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 124 bp overlap
CTCF 1 dataset
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 148 bp overlap
E2F6 3 datasets
ChIP K-562 ENCSR000EWJ.E2F6.K-562 174 bp overlap
ChIP K562 ENCFF136LTS 259 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 137 bp overlap
ESR1 2 datasets
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 133 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 252 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 259 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 230 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 196 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BJR.NR3C1.A-549 106 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 204 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 164 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 182 bp overlap
ZNF114 1 dataset
ChIP GM23338 ENCFF631OSW 259 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 145 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 235 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 219 bp overlap
ZNF7 1 dataset
ChIP HepG2 ENCFF983XQI 209 bp overlap