chr2 : 206,150,090 206,150,492
402 bp 22 TFs 2 linked genes
This 402 bp open chromatin element is linked to NDUFS1 and EEF1B2 and is bound by 22 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
NDUFS1 9.0 kb Proximal Proximity
EEF1B2 9.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:206,145,090 – 206,155,492
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
22 transcription factors
Source
Cell type
CDK9 1 dataset
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 176 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 225 bp overlap
ERG 1 dataset
ChIP VCaP GSE49091.ERG.VCaP 126 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 341 bp overlap
ChIP DE DE-FOXA2-2 356 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 134 bp overlap
GATA2 2 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 137 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 137 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 402 bp overlap
ChIP DE DE-GATA4-2 402 bp overlap
ChIP foregut GSE117136.GATA4.foregut 270 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 357 bp overlap
ChIP DE DE-GATA6-2 402 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 258 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 350 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 354 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 400 bp overlap
KDM5B 1 dataset
ChIP SUM159 GSE46055.KDM5B.SUM159 125 bp overlap
KMT2A 1 dataset
ChIP THP-1 GSE79899.KMT2A.THP-1 190 bp overlap
MYB 1 dataset
ChIP THP-1 GSE90769.MYB.THP-1 152 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 198 bp overlap
NEUROD1 1 dataset
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 102 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 86 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 307 bp overlap
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 174 bp overlap
SMARCA4 2 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 184 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 162 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 358 bp overlap
SUPT6H 1 dataset
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 172 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 197 bp overlap
ZNF205 1 dataset
ChIP HEK293T GSE78099.ZNF205.HEK293T 245 bp overlap