chr2 : 98,191,995 98,192,632
637 bp 16 TFs 1 linked gene
This 637 bp open chromatin element is linked to VWA3B and is bound by 16 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
VWA3B at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:98,186,995 – 98,197,632
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
CTCF 3 datasets
ChIP aorta_thoracic ENCSR668BTN.CTCF.aorta_thoracic 106 bp overlap
ChIP heart_left-ventricle ENCSR791AYW.CTCF.heart_left-ventricle 121 bp overlap
ChIP thoracic-aorta ENCSR549TXG.CTCF.thoracic-aorta 127 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF093OYK 278 bp overlap
ChIP BLaER1 ENCFF364PUR 251 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 631 bp overlap
ChIP DE DE-FOXA2-2 482 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 580 bp overlap
ChIP DE DE-GATA4-2 637 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 387 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 606 bp overlap
ChIP DE DE-GATA6-2 637 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 637 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 618 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 567 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 444 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 637 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 637 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 266 bp overlap
IRF1 1 dataset
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 178 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 565 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 309 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 530 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 388 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 637 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 505 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 601 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 382 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 410 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 418 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 333 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 106 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 499 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 631 bp overlap
YAP1 1 dataset
ChIP hiPSC GSE111930.YAP1.hiPSC 132 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 203 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 324 bp overlap