chr2 : 53,583,272 – 53,583,476
204 bp 16 TFs 0 linked genes
This 204 bp open chromatin element has no linked target genes and is bound by 16 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:53,578,272 – 53,588,476
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
BARX2 1 dataset
Motif DE_24h DE_24h-BARX2_MA1471.2 9 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 180 bp overlap
FOXA1 2 datasets
ChIP breast-cancer_ENOB-2848 GSE128018.FOXA1.breast-cancer_ENOB-2848 204 bp overlap
ChIP breast-cancer_ENOB-2849 GSE128018.FOXA1.breast-cancer_ENOB-2849 95 bp overlap
GATA4 2 datasets
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 204 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 152 bp overlap
GATA6 3 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 118 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 204 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 204 bp overlap
JUN 2 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 129 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 144 bp overlap
MGA::EVX1 1 dataset
Motif DE_24h DE_24h-MGAEVX1_MA1960.2 11 bp overlap
Msgn1 1 dataset
Motif DE_24h DE_24h-Msgn1_MA1524.3 10 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 204 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 204 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 204 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 86 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 118 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 204 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 50 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 147 bp overlap
TBX19 1 dataset
Motif DE_24h DE_24h-TBX19_MA0804.2 17 bp overlap
TBX2 1 dataset
Motif DE_24h DE_24h-TBX2_MA0688.2 9 bp overlap
TBX21 1 dataset
Motif DE_24h DE_24h-TBX21_MA0690.3 10 bp overlap
TBXT 1 dataset
Motif DE_24h DE_24h-TBXT_MA0009.2 16 bp overlap
ZSCAN4 1 dataset
Motif DE_24h DE_24h-ZSCAN4_MA1155.1 15 bp overlap
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