chr20 : 2,050,312 2,050,930
618 bp 15 TFs 1 linked gene
This 618 bp open chromatin element is linked to STK35 and is bound by 15 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
STK35 52.3 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:2,045,312 – 2,055,930
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
15 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 223 bp overlap
EZH2 1 dataset
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 364 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 598 bp overlap
ChIP DE DE-FOXA2-2 581 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 618 bp overlap
ChIP DE DE-GATA4-2 618 bp overlap
ChIP foregut GSE117136.GATA4.foregut 515 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 595 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 474 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 618 bp overlap
ChIP DE DE-GATA6-2 618 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 607 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 560 bp overlap
ChIP foregut GSE117136.GATA6.foregut 567 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 571 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 312 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 411 bp overlap
MZF1 2 datasets
Motif DE_60h DE_60h-MZF1_MA0056.3 8 bp overlap
Motif DE_72h DE_72h-MZF1_MA0056.3 8 bp overlap
PDX1 4 datasets
ChIP hESC GSE58685.PDX1.hESC 248 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 332 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 150 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 400 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 266 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 618 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 401 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 618 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 617 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 223 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 201 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 508 bp overlap
Vdr 2 datasets
Motif DE_60h DE_60h-Vdr_MA0693.4 7 bp overlap
Motif DE_72h DE_72h-Vdr_MA0693.4 7 bp overlap
ZNF485 1 dataset
ChIP HEK293T GSE78099.ZNF485.HEK293T 265 bp overlap