chr19 : 33,958,246 33,958,760
514 bp 13 TFs 4 linked genes
This 514 bp open chromatin element is linked to 4 target genes and is bound by 13 transcription factors.
Linked Genes
4 genes
Gene Expression Dist. to TSS Distance Link type
SUNO1 52.1 kb Distal Multiome
KCTD15 161.6 kb Distal Multiome
LSM14A 214.0 kb Distal Multiome
GARRE1 296.1 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:33,953,246 – 33,963,760
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 341 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 392 bp overlap
ChIP DE DE-FOXA2-2 399 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 514 bp overlap
ChIP DE DE-GATA4-2 514 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 476 bp overlap
ChIP DE DE-GATA6-2 514 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 514 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 475 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 514 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 514 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 466 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 514 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 463 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 319 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 203 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 514 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 443 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 388 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 386 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 447 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 418 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 514 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 514 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 221 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 207 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 267 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 496 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 244 bp overlap