chr19 : 20,066,768 20,067,242
474 bp 8 TFs 8 linked genes
This 474 bp open chromatin element is linked to 8 target genes and is bound by 8 transcription factors.
Linked Genes
8 genes
Gene Expression Dist. to TSS Distance Link type
ZNF90 11.0 kb Distal Multiome
ZNF682 27.5 kb Distal Multiome
ZNF486 100.2 kb Distal Multiome
ZNF93 166.1 kb Distal Multiome
ENSG00000267383 171.4 kb Distal Multiome
ZNF253 201.1 kb Distal Multiome
ZNF506 245.3 kb Distal Multiome
ENSG00000291177 290.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:20,061,768 – 20,072,242
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
8 transcription factors
Source
Cell type
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 474 bp overlap
ChIP DE DE-FOXA2-2 474 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 474 bp overlap
ChIP DE DE-GATA4-2 474 bp overlap
ChIP foregut GSE117136.GATA4.foregut 452 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 450 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 271 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 474 bp overlap
ChIP DE DE-GATA6-2 474 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 339 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 354 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 382 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 474 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 338 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 323 bp overlap
ChIP foregut GSE117136.GATA6.foregut 474 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 434 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 165 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 474 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 290 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 375 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 396 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 474 bp overlap