chr18 : 64,265,119 64,265,650
531 bp 12 TFs 1 linked gene
This 531 bp open chromatin element is linked to LINC01538 and is bound by 12 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC01538 5.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:64,260,119 – 64,270,650
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
AR 2 datasets
ChIP breast-cancer_ENOB-2852 GSE128018.AR.breast-cancer_ENOB-2852 228 bp overlap
ChIP prostate_P1_T GSE130408.AR.prostate_P1_T 143 bp overlap
FOXA1 4 datasets
ChIP LNCaP_1F5 GSE30623.FOXA1.LNCaP_1F5 130 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 531 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 106 bp overlap
ChIP prostate_2078_T GSE130408.FOXA1.prostate_2078_T 262 bp overlap
FOXA2 5 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 197 bp overlap
ChIP DE DE-FOXA2-1 531 bp overlap
ChIP DE DE-FOXA2-2 531 bp overlap
ChIP pancreas_CARN1618 ERP008682.FOXA2.pancreas_CARN1618 337 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 513 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 459 bp overlap
ChIP DE DE-GATA4-2 531 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 531 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 531 bp overlap
GATA6 7 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 221 bp overlap
ChIP DE DE-GATA6-1 505 bp overlap
ChIP DE DE-GATA6-2 531 bp overlap
ChIP H9 ERP004206.GATA6.H9 337 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 515 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 275 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 531 bp overlap
HOXB13 3 datasets
ChIP prostate_2078_T GSE130408.HOXB13.prostate_2078_T 257 bp overlap
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 240 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 177 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 349 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 128 bp overlap
ChIP hESC GSE18292.NANOG.hESC 130 bp overlap
ONECUT1 2 datasets
ChIP H9 ERP004206.ONECUT1.H9 418 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 531 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 189 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 178 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 350 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 494 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 350 bp overlap