DE-3

DE-3.5

Submodule 27 genes

Neuronal and epithelial differentiation factors

This module contains 27 genes including SNCA, NTF3, GRK5, GRHL2, and TRPM6, with enrichment in neuronal development, epithelial differentiation, and ion channel regulation. Knockdown of SOX17 activates this module, while knockdown of EOMESODERMIN, FOXA2, and GSC represses it.

Notable genes: SNCA NTF3 GRK5 GRHL2 TRPM6 IKZF2 ASPH NOVA1

TF Regulatory Network

Direction indicates the effect of TF knockdown on this submodule (↑ = KD upregulates; ↓ = KD downregulates).

Evidence: Direction: Max binding-only shown:
Perturbation + Binding
Perturbation only
Binding only
TF Dir NES #gRNA padj Bind OR

Enriched Terms

GO terms and pathway annotations enriched in this gene set (g:Profiler).


Module Genes (27)

All genes assigned to this co-expression submodule.

Gene Type Publications

Local co-expression graph for member genes built from Hotspot z-scores. Adjust the z-score threshold and repulsion sliders to explore the neighbourhood.

Gene Co-expression Network

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Low
High z