DE-2

DE-2.18

Submodule 16 genes

Lipid metabolism and protein degradation processes

This 16-gene module includes LYPLAL1, DMGDH, RNF13, and TTC8, with top enriched terms indicating roles in lipid metabolism, protein ubiquitination, and proteasomal degradation. Knockdown of SOX17 activates this module, while knockdown of EOMESODERMIN represses it. The module's enrichment suggests coordinated regulation of lipid catabolism and protein quality control during endoderm differentiation.


TF Regulatory Network

Direction indicates the effect of TF knockdown on this submodule (↑ = KD upregulates; ↓ = KD downregulates).

Evidence: Direction: Max binding-only shown:
Perturbation + Binding
Perturbation only
Binding only
TF Dir NES #gRNA padj Bind OR

Enriched Terms

GO terms and pathway annotations enriched in this gene set (g:Profiler).


Module Genes (16)

All genes assigned to this co-expression submodule.

Gene Type Publications

Local co-expression graph for member genes built from Hotspot z-scores. Adjust the z-score threshold and repulsion sliders to explore the neighbourhood.

Gene Co-expression Network

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Low
High z