DE-1

DE-1.42

Submodule 12 genes

Mitochondrial function and protein synthesis pathways

This 12-gene module includes NAA10, SDHC, CLPP, EIF4E2, and TRAPPC4, with enrichment in mitochondrial oxidative phosphorylation, protein synthesis, and mitochondrial organization. Knockdown of SOX17 and FOXH1 activates this module. No repressing TFs were identified for this module.

Notable genes: NAA10 SDHC CLPP EIF4E2 TRAPPC4 PAM16 NIT2 NDUFAF3 Top TFs: SOX17 FOXH1

TF Regulatory Network

Direction indicates the effect of TF knockdown on this submodule (↑ = KD upregulates; ↓ = KD downregulates).

Evidence: Direction: Max binding-only shown:
Perturbation + Binding
Perturbation only
Binding only
TF Dir NES #gRNA padj Bind OR

Enriched Terms

GO terms and pathway annotations enriched in this gene set (g:Profiler).


Module Genes (12)

All genes assigned to this co-expression submodule.

Gene Type Publications

Local co-expression graph for member genes built from Hotspot z-scores. Adjust the z-score threshold and repulsion sliders to explore the neighbourhood.

Gene Co-expression Network

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Low
High z