ZNF521
zinc finger protein 521 | EHZF, Evi3

Enables protein domain specific binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within neuron fate commitment. Located in nucleoplasm. [provided by Alliance of Genome Resources, Jul 2025]

Member of: DE-9 DE-9.2 Developmental clusters: GC2
Biological processes 8 terms
Expression (TPM)
ZNF521 — as a Regulated Gene

TFs regulating ZNF521 0 TFs

Transcription factors with Perturb-seq knockdown data for ZNF521. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = ZNF521 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to ZNF521

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of ZNF521, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr18:25,239,606–25,240,577 112.1 kb Distal (>10kb) Multiome 296
chr18:25,349,158–25,349,342 1.9 kb Proximal (<10kb) 82
chr18:25,349,443–25,350,431 2.3 kb Proximal (<10kb) Multiome 318
chr18:25,350,696–25,351,213 at TSS At TSS 268
chr18:25,351,730–25,352,560 152 bp At TSS Multiome 514

Genome Browser

Genomic view of the ZNF521 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr18:25,229,606 – 25,362,560
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq