chr18 : 44,685,115 44,685,751
636 bp 12 TFs 2 linked genes
This 636 bp open chromatin element is linked to SETBP1 and SETBP1-DT and is bound by 12 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
SETBP1 4.2 kb Proximal Proximity
SETBP1-DT 5.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:44,680,115 – 44,690,751
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 129 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 316 bp overlap
FOXA1 3 datasets
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 165 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 211 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 110 bp overlap
FOXA2 2 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 212 bp overlap
ChIP DE DE-FOXA2-2 369 bp overlap
GATA4 6 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 266 bp overlap
ChIP DE DE-GATA4-1 609 bp overlap
ChIP DE DE-GATA4-2 624 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 567 bp overlap
ChIP foregut GSE117136.GATA4.foregut 430 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 602 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 507 bp overlap
ChIP DE DE-GATA6-2 636 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 636 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 636 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 636 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 614 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 636 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 636 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 543 bp overlap
ChIP foregut GSE117136.GATA6.foregut 636 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 416 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 335 bp overlap
HNF1B 1 dataset
ChIP foregut GSE117136.HNF1B.foregut 240 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 480 bp overlap
NEUROD1 2 datasets
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 319 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 196 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 151 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 485 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 625 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 483 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 625 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 300 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 479 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 379 bp overlap