chr18 : 35,370,885 35,371,262
377 bp 9 TFs 1 linked gene
This 377 bp open chromatin element is linked to ZNF396 and is bound by 9 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ZNF396 6.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:35,365,885 – 35,376,262
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
9 transcription factors
Source
Cell type
CRX 2 datasets
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 199 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 202 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 132 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 288 bp overlap
ChIP DE DE-FOXA2-2 377 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 323 bp overlap
ChIP DE DE-GATA4-2 377 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 324 bp overlap
ChIP DE DE-GATA6-2 352 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 290 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 358 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 377 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 237 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 333 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 377 bp overlap
HMGA1 1 dataset
ChIP IMR-90_RAS-induced GSE111841.HMGA1.IMR-90_RAS-induced 144 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 180 bp overlap
PAX5 1 dataset
ChIP fetal_testis GSE100639.PAX5.fetal_testis 165 bp overlap