chr1 : 247,356,100 247,356,573
473 bp 11 TFs 2 linked genes
This 473 bp open chromatin element is linked to ZNF496-DT and ENSG00000286216 and is bound by 11 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ZNF496-DT 1.3 kb Proximal Proximity
ENSG00000286216 8.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:247,351,100 – 247,361,573
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
11 transcription factors
Source
Cell type
ARID2 3 datasets
ChIP Aska-SS GSE108025.ARID2.Aska-SS 233 bp overlap
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 175 bp overlap
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 216 bp overlap
MCM3 2 datasets
ChIP K-562 ENCSR990AZC.MCM3.K-562 80 bp overlap
ChIP K-562 ENCSR990AZC.MCM3.K-562 151 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 188 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 402 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 399 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 473 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 416 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 318 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 404 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 354 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 272 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 236 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 286 bp overlap
STAT1 2 datasets
ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 104 bp overlap
ChIP CD14_LPS GSE43036.STAT1.CD14_LPS 84 bp overlap
TRIM28 2 datasets
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 160 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 391 bp overlap
ZBTB5 1 dataset
ChIP K-562 ENCSR389PWB.ZBTB5.K-562 132 bp overlap