Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

14 transcription factors

CTCF 34 datasets

ChIP AG09309 ENCFF478XPS 137 bp overlap

Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap

ChIP GM23338 ENCFF531QOI 76 bp overlap

ChIP GM23338 ENCFF772DML 137 bp overlap

ChIP H1 ENCFF230QSV 137 bp overlap

ChIP H1 ENCFF764RHO 137 bp overlap

ChIP H9 ENCFF152GTF 137 bp overlap

ChIP HAP1 GSE152721.CTCF.HAP1 120 bp overlap

ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 62 bp overlap

ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 82 bp overlap

ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 137 bp overlap

ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 65 bp overlap

ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 137 bp overlap

ChIP HCT-116 GSE131606.CTCF.HCT-116 137 bp overlap

ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 112 bp overlap

ChIP HL-60 GSE131577.CTCF.HL-60 113 bp overlap

ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 69 bp overlap

ChIP HeLa-S3 ENCFF255ASZ 137 bp overlap

ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 136 bp overlap

ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 119 bp overlap

ChIP Loucy ENCFF359TVQ 137 bp overlap

ChIP Loucy ENCSR464DKE.CTCF.Loucy 110 bp overlap

ChIP MCF-10A GSE98551.CTCF.MCF-10A 137 bp overlap

ChIP PC-3 ENCSR359LOD.CTCF.PC-3 130 bp overlap

ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 126 bp overlap

ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 67 bp overlap

ChIP endodermal cell ENCFF471YCZ 112 bp overlap

ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 105 bp overlap

ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 137 bp overlap

ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 137 bp overlap

ChIP keratinocyte ENCFF667ULX 137 bp overlap

ChIP osteoblast ENCFF491ZJZ 137 bp overlap

ChIP osteoblast ENCSR000APF.CTCF.osteoblast 111 bp overlap

ChIP retinal pigment epithelial cell ENCFF810AAG 137 bp overlap

DDX5 1 dataset

ChIP NTERA2 GSE58641.DDX5.NTERA2 137 bp overlap

Gfi1B 1 dataset

Motif DE_12h DE_12h-Gfi1B_MA0483.2 10 bp overlap

NFIB 1 dataset

Motif DE_12h DE_12h-NFIB_MA1643.2 17 bp overlap

NFIC::TLX1 1 dataset

Motif DE_12h DE_12h-NFICTLX1_MA0119.1 14 bp overlap

RAD21 2 datasets

ChIP H1 ENCFF698EWO 137 bp overlap

ChIP HCT-116 GSE121355.RAD21.HCT-116 127 bp overlap

SMC1 1 dataset

ChIP HCT-116_RAD21-mAC GSE104888.SMC1.HCT-116_RAD21-mAC 89 bp overlap

SMC1A 1 dataset

ChIP A-549 GSE76893.SMC1A.A-549 56 bp overlap

ZNF135 1 dataset

Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap

ZNF362 1 dataset

ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 137 bp overlap

ZNF384 5 datasets

ChIP HEK293T ENCFF019DZX 120 bp overlap

ChIP HEK293T ENCSR882ICT.ZNF384.HEK293T 137 bp overlap

ChIP Hep-G2 ENCSR101FJU.ZNF384.Hep-G2 64 bp overlap

ChIP K-562 ENCSR000EFP.ZNF384.K-562 78 bp overlap

ChIP K562 ENCFF365NXQ 137 bp overlap

ZNF460 1 dataset

Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap

ZNF550 1 dataset

ChIP Hep-G2 ENCSR198BHH.ZNF550.Hep-G2 51 bp overlap

ZNF707 1 dataset

Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap

Genome Browser