chr13 : 62,029,493 62,029,703
210 bp 12 TFs 1 linked gene
This 210 bp open chromatin element is linked to LINC00358 and is bound by 12 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC00358 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:62,024,493 – 62,034,703
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
BRD4 2 datasets
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 210 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 194 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF346MCV 160 bp overlap
ELK4 2 datasets
ChIP HEK293 ENCFF309WLN 210 bp overlap
ChIP HEK293 ENCFF309WLN 210 bp overlap
LHX2 1 dataset
ChIP retina_pigment GSE60024.LHX2.retina_pigment 163 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 210 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 210 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 210 bp overlap
POU5F1 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR362VCG.POU5F1.neuron_bipolar_doxy_4d 84 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 210 bp overlap
RARA 1 dataset
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 210 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 143 bp overlap