chr12 : 96,916,857 96,917,140
283 bp 5 TFs 1 linked gene
This 283 bp open chromatin element is linked to NEDD1 and is bound by FOXA2, GATA4, GATA6, ONECUT1, and ZNF146.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
NEDD1 9.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:96,911,857 – 96,922,140
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
5 transcription factors
Source
Cell type
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 171 bp overlap
ChIP DE DE-FOXA2-2 122 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 94 bp overlap
ChIP DE DE-GATA4-2 238 bp overlap
ChIP foregut GSE117136.GATA4.foregut 283 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 283 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 283 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 283 bp overlap
ChIP DE DE-GATA6-2 216 bp overlap
ChIP foregut GSE117136.GATA6.foregut 136 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 272 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 272 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 85 bp overlap
ZNF146 1 dataset
ChIP HEK293 ENCFF602LWH 66 bp overlap