chr12 : 41,658,591 41,658,753
162 bp 12 TFs 1 linked gene
This 162 bp open chromatin element is linked to RNA5SP360 and is bound by 12 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RNA5SP360 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:41,653,591 – 41,663,753
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
AR 5 datasets
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 116 bp overlap
ChIP MDA-MB-453_DHT GSE74069.AR.MDA-MB-453_DHT 110 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 137 bp overlap
ChIP MDA-MB-453_R1881_SICTR GSE70161.AR.MDA-MB-453_R1881_SICTR 76 bp overlap
ChIP MDA-MB-453_R1881_SIPIAS1 GSE70161.AR.MDA-MB-453_R1881_SIPIAS1 106 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 162 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 134 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 162 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 162 bp overlap
ChIP DE DE-FOXA2-2 162 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 162 bp overlap
GATA3 4 datasets
ChIP Kelly GSE65664.GATA3.Kelly 162 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 162 bp overlap
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 134 bp overlap
ChIP MCF-7_ICI GSE81510.GATA3.MCF-7_ICI 130 bp overlap
GATA4 8 datasets
ChIP DE DE-GATA4-1 162 bp overlap
ChIP DE DE-GATA4-2 162 bp overlap
ChIP G296S GSE85628.GATA4.G296S 162 bp overlap
ChIP G296S_2 GSE85628.GATA4.G296S_2 162 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 162 bp overlap
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 152 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 162 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 162 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 162 bp overlap
ChIP foregut GSE117136.GATA6.foregut 112 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 162 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 162 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 162 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 162 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 162 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 161 bp overlap
TBX5 1 dataset
ChIP hiPSC GSE81585.TBX5.hiPSC 148 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 162 bp overlap