chr12 : 7,853,999 7,854,648
649 bp 19 TFs 1 linked gene
This 649 bp open chromatin element is linked to ENSG00000241828 and is bound by 19 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000241828 5.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:7,848,999 – 7,859,648
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
19 transcription factors
Source
Cell type
BRD4 2 datasets
ChIP SW480 GSE73319.BRD4.SW480 150 bp overlap
ChIP SW480 GSE73319.BRD4.SW480 419 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 277 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 88 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 158 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 302 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 649 bp overlap
ChIP DE DE-FOXA2-2 649 bp overlap
GATA4 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 175 bp overlap
ChIP DE DE-GATA4-1 649 bp overlap
ChIP DE DE-GATA4-2 649 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 248 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 649 bp overlap
ChIP DE DE-GATA6-2 649 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 502 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 611 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 506 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 637 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 640 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 506 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 563 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 135 bp overlap
RNF2 2 datasets
ChIP K-562 ENCSR820GND.RNF2.K-562 306 bp overlap
ChIP K562 ENCFF022XJR 417 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 142 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 649 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 510 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 327 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 491 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 539 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 570 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 156 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 311 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 480 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 378 bp overlap