chr11 : 108,602,955 – 108,603,181
226 bp 12 TFs 1 linked gene
This 226 bp open chromatin element is linked to EXPH5 and is bound by 12 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
EXPH5 9.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:108,597,955 – 108,608,181
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 172 bp overlap
CHD2 2 datasets
ChIP K-562 ENCSR000EHD.CHD2.K-562 142 bp overlap
ChIP K562 ENCFF857WME 99 bp overlap
CTCF 116 datasets
ChIP CUTLL1_DMSO GSE130140.CTCF.CUTLL1_DMSO 185 bp overlap
ChIP CUTLL1_GSI GSE130140.CTCF.CUTLL1_GSI 160 bp overlap
ChIP Caco-2 ENCFF753NZV 226 bp overlap
ChIP Caco-2 ENCFF934QYS 210 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 209 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 224 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 51 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 146 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 170 bp overlap
ChIP GM12872 ENCFF697BYI 226 bp overlap
ChIP GM12873 ENCFF711LOS 226 bp overlap
ChIP GM12875 ENCFF081UCQ 226 bp overlap
ChIP GM12878 ENCFF217EAX 226 bp overlap
ChIP GM12878 ENCFF485TGR 226 bp overlap
ChIP GM12878 GSE76922.CTCF.GM12878 226 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 215 bp overlap
ChIP GM23338 ENCFF832KWE 226 bp overlap
ChIP GM23338 ENCFF832KWE 190 bp overlap
ChIP H1 ENCFF764RHO 220 bp overlap
ChIP H9 ENCFF152GTF 226 bp overlap
ChIP H9 ENCFF152GTF 129 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 226 bp overlap
ChIP HAP1 GSE94992.CTCF.HAP1 148 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 226 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 162 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 189 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 164 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 191 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 226 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 150 bp overlap
ChIP HCT116 ENCFF003KHP 226 bp overlap
ChIP HEC-1-B GSE139679.CTCF.HEC-1-B 218 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 134 bp overlap
ChIP HEK293 ENCFF498RMM 226 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 117 bp overlap
ChIP HFFc6 ENCFF005CJI 150 bp overlap
ChIP HFFc6 ENCFF005CJI 173 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 192 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 226 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 218 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 119 bp overlap
ChIP HepG2 ENCFF127KUP 226 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 132 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 107 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 143 bp overlap
ChIP K-562_13189 GSE131349.CTCF.K-562_13189 152 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 113 bp overlap
ChIP K-562_15173 GSE131349.CTCF.K-562_15173 152 bp overlap
ChIP K-562_15923 GSE131349.CTCF.K-562_15923 101 bp overlap
ChIP K-562_5635 GSE131349.CTCF.K-562_5635 106 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 134 bp overlap
ChIP K-562_RF2-mutation GSE140868.CTCF.K-562_RF2-mutation 139 bp overlap
ChIP K-562_WT GSE140868.CTCF.K-562_WT 132 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.CTCF.K-562_dCas9-KRAB 226 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 226 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 214 bp overlap
ChIP K562 ENCFF400DFR 226 bp overlap
ChIP K562 ENCFF430KTH 226 bp overlap
ChIP K562 ENCFF430KTH 106 bp overlap
ChIP K562 ENCFF598YSU 205 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 226 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 101 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 226 bp overlap
ChIP MCF-10CA1a GSE98551.CTCF.MCF-10CA1a 183 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 213 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 226 bp overlap
ChIP Peyer's patch ENCFF828IDE 226 bp overlap
ChIP Peyers-patch ENCSR799WDT.CTCF.Peyers-patch 170 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 204 bp overlap
ChIP SK-N-SH ENCFF575DMG 226 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 96 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 157 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 226 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 198 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 224 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 60 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 181 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 166 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 149 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 164 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 207 bp overlap
ChIP VCaP ENCFF858YQT 226 bp overlap
ChIP VCaP ENCFF858YQT 218 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 226 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 226 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 226 bp overlap
ChIP breast_epithelium ENCSR697YIN.CTCF.breast_epithelium 147 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 226 bp overlap
ChIP colon_transverse ENCSR102CSD.CTCF.colon_transverse 226 bp overlap
ChIP colon_transverse ENCSR833FWC.CTCF.colon_transverse 214 bp overlap
ChIP endodermal cell ENCFF471YCZ 226 bp overlap
ChIP endodermal cell ENCFF471YCZ 133 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 226 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 201 bp overlap
ChIP esophagus squamous epithelium ENCFF037IYT 226 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 226 bp overlap
ChIP esophagus_squamous-epithelium ENCSR838RUX.CTCF.esophagus_squamous-epithelium 184 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 121 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 194 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 188 bp overlap
ChIP heart ENCSR778ZPK.CTCF.heart 213 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 226 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 216 bp overlap
ChIP lymphoblast_mut GSE155324.CTCF.lymphoblast_mut 224 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 226 bp overlap
ChIP neural cell ENCFF335ADI 226 bp overlap
ChIP neural crest cell ENCFF182LWK 226 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 226 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 172 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 196 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 176 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 226 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 134 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 210 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 208 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 121 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 220 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 168 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR387UWP.HDAC1.K-562 140 bp overlap
L3MBTL2 3 datasets
ChIP HEK293T ENCFF482NJV 226 bp overlap
ChIP HEK293T ENCSR862PNL.L3MBTL2.HEK293T 226 bp overlap
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 226 bp overlap
MGA 1 dataset
ChIP K562 ENCFF140CEX 226 bp overlap
MZF1 2 datasets
ChIP HEK293 ENCFF683ZWN 75 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 173 bp overlap
NFATC3 1 dataset
ChIP K-562 ENCSR051OUX.NFATC3.K-562 215 bp overlap
RAD21 2 datasets
ChIP H1 ENCFF967OJF 226 bp overlap
ChIP K562 ENCFF634XYR 226 bp overlap
TBP 1 dataset
ChIP K-562 GSE55306.TBP.K-562 75 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 90 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 195 bp overlap
Huangfu Lab · Publications · Resources · Contact