chr10 : 52,950,696 52,950,860
164 bp 5 TFs 1 linked gene
This 164 bp open chromatin element is linked to ENSG00000285958 and is bound by CTCF, RAD21, SMC3, STAG1, and ZNF652.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000285958 4.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:52,945,696 – 52,955,860
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
5 transcription factors
Source
Cell type
CTCF 45 datasets
ChIP AG04450 ENCFF116DJL 164 bp overlap
ChIP C4-2B ENCFF821XVN 84 bp overlap
ChIP Caco-2 ENCFF934QYS 164 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 152 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 164 bp overlap
ChIP GM12874 ENCFF942MTD 164 bp overlap
ChIP GM12875 ENCFF081UCQ 164 bp overlap
ChIP GM12878 ENCFF511URZ 164 bp overlap
ChIP GM23338 ENCFF531QOI 117 bp overlap
ChIP GM23338 ENCFF772DML 164 bp overlap
ChIP H1 ENCFF230QSV 161 bp overlap
ChIP H1 ENCFF414GZI 164 bp overlap
ChIP H1 ENCFF764RHO 164 bp overlap
ChIP H54 ENCFF255TVO 164 bp overlap
ChIP H9 ENCFF152GTF 164 bp overlap
ChIP HEC-1-B_R1-mutation GSE140868.CTCF.HEC-1-B_R1-mutation 55 bp overlap
ChIP HEC-1-B_ac1-CBS-deletion GSE140868.CTCF.HEC-1-B_ac1-CBS-deletion 58 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 117 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 93 bp overlap
ChIP HepG2 ENCFF127KUP 164 bp overlap
ChIP HepG2 ENCFF757EKU 164 bp overlap
ChIP MCF-7 ENCFF198DQX 164 bp overlap
ChIP MCF-7 ENCFF414SZG 160 bp overlap
ChIP MCF-7 ENCFF494VXA 164 bp overlap
ChIP MCF-7 ENCFF844STM 164 bp overlap
ChIP MCF-7 ENCFF954TUV 164 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 164 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 142 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 104 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 164 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 111 bp overlap
ChIP endodermal cell ENCFF471YCZ 164 bp overlap
ChIP endothelial cell of umbilical vein ENCFF455OQM 150 bp overlap
ChIP endothelial cell of umbilical vein ENCFF677IZD 164 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 151 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 116 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 164 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 164 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 164 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 106 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 111 bp overlap
ChIP keratinocyte ENCFF667ULX 164 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 109 bp overlap
ChIP neural progenitor cell ENCFF420RBO 164 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 150 bp overlap
RAD21 8 datasets
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 126 bp overlap
ChIP H1 ENCFF698EWO 164 bp overlap
ChIP H1 ENCFF967OJF 164 bp overlap
ChIP Hep-G2 ENCSR000EEG.RAD21.Hep-G2 120 bp overlap
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 119 bp overlap
ChIP HepG2 ENCFF360ZSW 164 bp overlap
ChIP HepG2 ENCFF906QIS 164 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 106 bp overlap
SMC3 1 dataset
ChIP HepG2 ENCFF745UAV 164 bp overlap
STAG1 2 datasets
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 139 bp overlap
ChIP HepG2 ENCFF843EBZ 164 bp overlap
ZNF652 1 dataset
ChIP HepG2 ENCFF331VPZ 164 bp overlap