chr10 : 45,962,798 45,963,006
208 bp 5 TFs 3 linked genes
This 208 bp open chromatin element is linked to PARGP1, ENSG00000290921, and TIMM23 and is bound by FOXA2, GATA4, GATA6, JUN, and SMAD2_3.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
PARGP1 9.1 kb Proximal Proximity
ENSG00000290921 9.4 kb Proximal Proximity
TIMM23 9.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:45,957,798 – 45,968,006
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
5 transcription factors
Source
Cell type
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 208 bp overlap
ChIP DE DE-FOXA2-2 208 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 208 bp overlap
ChIP DE DE-GATA4-2 208 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 208 bp overlap
ChIP DE DE-GATA6-2 208 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 208 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 208 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 208 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 208 bp overlap
JUN 1 dataset
ChIP DE_D1 S40-DE-d1-JUN-exp2 97 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 163 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 131 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 208 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 167 bp overlap