chr9 : 25,675,944 25,676,320
376 bp 9 TFs 1 linked gene
This 376 bp open chromatin element is linked to TUSC1 and is bound by 9 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
TUSC1 2.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:25,670,944 – 25,681,320
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
9 transcription factors
Source
Cell type
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 280 bp overlap
ChIP DE DE-FOXA2-2 335 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 347 bp overlap
ChIP DE DE-GATA4-2 376 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 324 bp overlap
ChIP DE DE-GATA6-2 307 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 320 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 256 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 312 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 262 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 340 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 376 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 217 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 155 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 150 bp overlap
NR3C1 1 dataset
ChIP U2OS_GLUCC ERP007081.NR3C1.U2OS_GLUCC 54 bp overlap
PGR 2 datasets
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 147 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 150 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 174 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 326 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 311 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 269 bp overlap