chr9 : 10,247,696 – 10,248,132
436 bp 20 TFs 0 linked genes
This 436 bp open chromatin element has no linked target genes and is bound by 20 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:10,242,696 – 10,253,132
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
DUX4 1 dataset
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 228 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 318 bp overlap
ChIP DE DE-FOXA2-2 313 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 414 bp overlap
ChIP DE DE-GATA4-2 434 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 386 bp overlap
ChIP DE DE-GATA6-2 436 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 428 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 165 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 254 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 367 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 177 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 231 bp overlap
KLF1 1 dataset
Motif DE_36h DE_36h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_36h DE_36h-KLF10_MA1511.2 9 bp overlap
KLF14 1 dataset
Motif DE_36h DE_36h-KLF14_MA0740.2 9 bp overlap
KLF2 1 dataset
Motif DE_36h DE_36h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif DE_36h DE_36h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_36h DE_36h-KLF5_MA0599.1 10 bp overlap
RUNX3 1 dataset
Motif DE_36h DE_36h-RUNX3_MA0684.3 8 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 255 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 268 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 360 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 166 bp overlap
SMARCA4 1 dataset
ChIP hiPSC GSE124903.SMARCA4.hiPSC 172 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 408 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 169 bp overlap
THRA 1 dataset
Motif DE_36h DE_36h-THRA_MA1969.2 18 bp overlap
ZNF740 1 dataset
Motif DE_36h DE_36h-ZNF740_MA0753.3 10 bp overlap
ZNF76 1 dataset
Motif DE_36h DE_36h-ZNF76_MA1716.2 17 bp overlap
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