chr8 : 18,394,080 – 18,394,290
210 bp 10 TFs 3 linked genes
This 210 bp open chromatin element is linked to NAT2, ENSG00000271654, and ENSG00000285624 and is bound by 10 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
NAT2 2.8 kb Proximal Proximity
ENSG00000271654 6.3 kb Proximal Proximity
ENSG00000285624 6.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:18,389,080 – 18,399,290
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
10 transcription factors
Source
Cell type
CTCF 11 datasets
ChIP C4-2B ENCFF821XVN 210 bp overlap
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
ChIP GM23338 ENCFF772DML 172 bp overlap
ChIP HCT116 ENCFF003KHP 210 bp overlap
ChIP RWPE2 ENCFF911IEE 210 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 210 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 210 bp overlap
ChIP endodermal cell ENCFF471YCZ 188 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 210 bp overlap
ChIP neural progenitor cell ENCFF420RBO 210 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 191 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 173 bp overlap
ChIP DE DE-GATA4-2 210 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 210 bp overlap
ChIP DE DE-GATA6-2 210 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 210 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 191 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 210 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 210 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 92 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 88 bp overlap
JUN 2 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 210 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 210 bp overlap
NR2F1 2 datasets
Motif DE_12h DE_12h-NR2F1_MA0017.3 12 bp overlap
Motif DE_24h DE_24h-NR2F1_MA0017.3 12 bp overlap
Nr2F6 2 datasets
Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap
Motif DE_24h DE_24h-Nr2F6_MA0728.1 15 bp overlap
RAD21 4 datasets
ChIP H1 ENCFF698EWO 210 bp overlap
ChIP H1 ENCFF967OJF 190 bp overlap
ChIP HCT116 ENCFF568PEO 210 bp overlap
ChIP MCF-7 ENCFF724VCQ 210 bp overlap
Rarg 2 datasets
Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap
Motif DE_24h DE_24h-Rarg_MA0859.2 15 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 210 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 210 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 210 bp overlap
SMARCC1 1 dataset
ChIP ESC S25-ESC-d0-BAF155-exp1 192 bp overlap
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