chr6 : 128,025,577 128,026,032
455 bp 10 TFs 1 linked gene
This 455 bp open chromatin element is linked to PTPRK-AS1 and is bound by 10 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PTPRK-AS1 1.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:128,020,577 – 128,031,032
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
10 transcription factors
Source
Cell type
CHD4 1 dataset
ChIP 501-mel GSE134848.CHD4.501-mel 131 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 319 bp overlap
ChIP DE DE-FOXA2-2 347 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 312 bp overlap
ChIP DE DE-GATA4-2 370 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 356 bp overlap
ChIP DE DE-GATA6-2 359 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 243 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 283 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 238 bp overlap
RAD21 1 dataset
ChIP H1 ENCFF967OJF 199 bp overlap
RUNX2 1 dataset
ChIP Karpas-45 GSE151819.RUNX2.Karpas-45 304 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 316 bp overlap
ZNF19 1 dataset
ChIP HEK293T GSE78099.ZNF19.HEK293T 139 bp overlap