chr6 : 127,110,791 127,111,522
731 bp 11 TFs 2 linked genes
This 731 bp open chromatin element is linked to ENSG00000293110 and RSPO3 and is bound by 11 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000293110 7.4 kb Proximal Proximity
RSPO3 7.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:127,105,791 – 127,116,522
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
11 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 286 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 328 bp overlap
ChIP DE DE-FOXA2-2 287 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 419 bp overlap
ChIP DE DE-GATA4-2 636 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 638 bp overlap
ChIP foregut GSE117136.GATA4.foregut 731 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 482 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 499 bp overlap
ChIP DE DE-GATA6-2 658 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 373 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 259 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 731 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 731 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 330 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 262 bp overlap
ChIP foregut GSE117136.GATA6.foregut 731 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 705 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 731 bp overlap
HNF1B 1 dataset
ChIP foregut GSE117136.HNF1B.foregut 246 bp overlap
NR3C1 2 datasets
ChIP A-549 ENCSR000BHF.NR3C1.A-549 191 bp overlap
ChIP A-549 ENCSR000BHG.NR3C1.A-549 58 bp overlap
PRDM1 1 dataset
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 132 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 645 bp overlap
SPI1 1 dataset
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 146 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 191 bp overlap