chr5 : 132,969,226 132,969,620
394 bp 12 TFs 2 linked genes
This 394 bp open chromatin element is linked to AFF4-DT and AFF4 and is bound by 12 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
AFF4-DT 5.5 kb Proximal Proximity
AFF4 5.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:132,964,226 – 132,974,620
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
Cebpa 1 dataset
ChIP BLaER1 ENCFF093OYK 114 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 230 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 394 bp overlap
ChIP DE DE-FOXA2-2 394 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 394 bp overlap
ChIP DE DE-GATA4-2 394 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 388 bp overlap
ChIP DE DE-GATA6-2 394 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 278 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 251 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 394 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 318 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 341 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 394 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 394 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 244 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 204 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 394 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 165 bp overlap