chr5 : 75,198,716 75,199,683
967 bp 16 TFs 1 linked gene
This 967 bp open chromatin element is linked to HMGCR and is bound by 16 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
HMGCR 138.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:75,193,716 – 75,204,683
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
ARNTL 1 dataset
ChIP U2OS_trough_DMOG GSE85096.ARNTL.U2OS_trough_DMOG 304 bp overlap
CDX2 1 dataset
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 305 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF798NMV 280 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 192 bp overlap
ChIP hESC GSE26097.EOMES.hESC 369 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 967 bp overlap
ChIP DE DE-FOXA2-2 967 bp overlap
GATA1 2 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 105 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 124 bp overlap
GATA2 2 datasets
ChIP ESF GSE108408.GATA2.ESF 197 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 340 bp overlap
GATA4 6 datasets
ChIP A-549 GSE85002.GATA4.A-549 291 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 210 bp overlap
ChIP DE DE-GATA4-1 967 bp overlap
ChIP DE DE-GATA4-2 967 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 483 bp overlap
ChIP foregut GSE117136.GATA4.foregut 274 bp overlap
GATA6 7 datasets
ChIP AGS GSE51705.GATA6.AGS 315 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 157 bp overlap
ChIP DE DE-GATA6-1 967 bp overlap
ChIP DE DE-GATA6-2 967 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 967 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 217 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 930 bp overlap
LMO2 1 dataset
ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 208 bp overlap
NR2F2 1 dataset
ChIP uterus_STROMA_ENDOMETRIUM GSE52008.NR2F2.uterus_STROMA_ENDOMETRIUM 135 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 136 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 905 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 929 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 185 bp overlap
SOX17 2 datasets
ChIP DE_D2 DED2-SOX17_Batch_II 218 bp overlap
ChIP DE_D2 DED2-SOX17_Batch_II 322 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 749 bp overlap