chr4 : 185,374,114 185,374,424
310 bp 13 TFs 1 linked gene
This 310 bp open chromatin element is linked to LRP2BP-AS1 and is bound by 13 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LRP2BP-AS1 3.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:185,369,114 – 185,379,424
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 257 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 310 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 310 bp overlap
ChIP DE DE-FOXA2-2 301 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 310 bp overlap
ChIP DE DE-GATA4-2 310 bp overlap
ChIP foregut GSE117136.GATA4.foregut 304 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 310 bp overlap
ChIP DE DE-GATA6-2 310 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 310 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 259 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 310 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 256 bp overlap
MYCN 1 dataset
ChIP SH-EP_pRRL-MYCN GSE111905.MYCN.SH-EP_pRRL-MYCN 79 bp overlap
POLR2A 2 datasets
ChIP GM12891 ENCFF012SUT 310 bp overlap
ChIP GM12891 ENCFF379FCI 310 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 310 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 241 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 310 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 196 bp overlap