chr4 : 94,844,262 94,844,631
369 bp 19 TFs 0 linked genes
This 369 bp open chromatin element has no linked target genes and is bound by 19 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:94,839,262 – 94,849,631
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
19 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP DND41_E GSE54379.BRD4.DND41_E 186 bp overlap
DPF2 2 datasets
ChIP BIN-67_ctrl GSE117734.DPF2.BIN-67_ctrl 189 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-K785R 191 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 244 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 190 bp overlap
ESR1 1 dataset
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 250 bp overlap
FOXA1 3 datasets
ChIP LNCaP_M253K GSE133386.FOXA1.LNCaP_M253K 85 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 108 bp overlap
ChIP breast-cancer_3487 GSE126004.FOXA1.breast-cancer_3487 167 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 369 bp overlap
ChIP DE DE-FOXA2-2 369 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 369 bp overlap
ChIP DE DE-GATA4-2 369 bp overlap
ChIP foregut GSE117136.GATA4.foregut 369 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 369 bp overlap
ChIP DE DE-GATA6-2 369 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 362 bp overlap
ChIP foregut GSE117136.GATA6.foregut 369 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 257 bp overlap
NUTM1 1 dataset
ChIP NMC24335 GSE96775.NUTM1.NMC24335 369 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 135 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 369 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 159 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 173 bp overlap
SMARCA4 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 346 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 367 bp overlap
SMARCC1 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-K785R 143 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 338 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 349 bp overlap
ZNF532 1 dataset
ChIP NMC24335 GSE96775.ZNF532.NMC24335 330 bp overlap