chr3 : 175,101,291 175,101,469
178 bp 17 TFs 0 linked genes
This 178 bp open chromatin element has no linked target genes and is bound by 17 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:175,096,291 – 175,106,469
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 178 bp overlap
BRD4 3 datasets
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 178 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 138 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.BRD4.LNCaP-clone-FGC_DHT-DMSO 112 bp overlap
CRX 2 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 178 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 178 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 111 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 178 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 153 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 178 bp overlap
FOXA1 10 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 172 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 178 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 119 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 178 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 178 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 173 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 160 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 155 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 178 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 178 bp overlap
FOXA2 4 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 115 bp overlap
ChIP DE DE-FOXA2-1 178 bp overlap
ChIP DE DE-FOXA2-2 178 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 178 bp overlap
GATA1 1 dataset
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 137 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 178 bp overlap
ChIP DE DE-GATA4-2 178 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 178 bp overlap
ChIP foregut GSE117136.GATA4.foregut 178 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 178 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 178 bp overlap
GATA6 11 datasets
ChIP AGS GSE51705.GATA6.AGS 178 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 102 bp overlap
ChIP DE DE-GATA6-1 178 bp overlap
ChIP DE DE-GATA6-2 178 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 178 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 135 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 178 bp overlap
ChIP foregut GSE117136.GATA6.foregut 178 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 178 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 178 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 178 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 178 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 96 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 178 bp overlap
TAL1 1 dataset
ChIP ProEs GSE59087.TAL1.ProEs 117 bp overlap