chr3:170,685,663–170,686,879

chr3 : 170,685,663 – 170,686,879

1,216 bp 9 TFs 5 linked genes

This 1.2 kb open chromatin element is linked to 5 target genes and is bound by 9 transcription factors.

Linked Genes

5 genes

Gene	Expression	Dist. to TSS	Distance	Link type
SLC7A14		100.0 kb	Distal	Multiome+HiCAR
RPL22L1		184.2 kb	Distal	Multiome
SLC7A14-AS1		218.8 kb	Distal	Multiome+HiCAR
EIF5A2		222.6 kb	Distal	Multiome
CLDN11		267.2 kb	Distal	Multiome+HiCAR

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

9 transcription factors

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 429 bp overlap

ChIP DE DE-FOXA2-2 586 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 794 bp overlap

ChIP DE DE-GATA4-2 1216 bp overlap

GATA6 6 datasets

ChIP DE DE-GATA6-1 756 bp overlap

ChIP DE DE-GATA6-2 961 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 444 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 618 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 386 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 680 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 332 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 243 bp overlap

SMAD2_3 3 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 461 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 56 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 481 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 289 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 590 bp overlap

ZNF324 1 dataset

Motif DE_72h DE_72h-ZNF324_MA1977.2 14 bp overlap