chr3 : 131,385,466 131,385,890
424 bp 11 TFs 2 linked genes
This 424 bp open chromatin element is linked to NUDT16 and NUDT16-DT and is bound by 11 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
NUDT16 3.7 kb Proximal Proximity
NUDT16-DT 4.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:131,380,466 – 131,390,890
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
11 transcription factors
Source
Cell type
E2F1 1 dataset
ChIP MCF-7 ENCFF692OYJ 196 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 341 bp overlap
ChIP DE DE-GATA4-2 331 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 303 bp overlap
ChIP DE DE-GATA6-2 369 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 250 bp overlap
MED1 1 dataset
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 146 bp overlap
POLR2A 3 datasets
ChIP H1 ENCFF566JSR 424 bp overlap
ChIP HepG2 ENCFF252NAR 330 bp overlap
ChIP HepG2 ENCFF350RIU 254 bp overlap
RBFOX2 2 datasets
ChIP HepG2 ENCFF554DMZ 130 bp overlap
ChIP HepG2 ENCFF939HTZ 130 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 176 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 285 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 415 bp overlap
SREBP2 2 datasets
ChIP monocyte GSE129202.SREBP2.monocyte 94 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 131 bp overlap