chr3 : 87,915,804 – 87,916,140
336 bp 22 TFs 0 linked genes
This 336 bp open chromatin element has no linked target genes and is bound by 22 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:87,910,804 – 87,921,140
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
22 transcription factors
Source
Cell type
Arid5a 1 dataset
Motif DE_48h DE_48h-Arid5a_MA0602.2 8 bp overlap
Bach1::Mafk 1 dataset
Motif DE_48h DE_48h-Bach1Mafk_MA0591.2 12 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 336 bp overlap
ChIP DE DE-FOXA2-2 336 bp overlap
GATA1::TAL1 1 dataset
Motif DE_48h DE_48h-GATA1TAL1_MA0140.3 17 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 336 bp overlap
ChIP DE DE-GATA4-2 336 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 336 bp overlap
ChIP DE DE-GATA6-2 336 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 315 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 336 bp overlap
MGA::EVX1 1 dataset
Motif DE_48h DE_48h-MGAEVX1_MA1960.2 11 bp overlap
Mafb 1 dataset
Motif DE_48h DE_48h-Mafb_MA0117.3 11 bp overlap
Mafg 1 dataset
Motif DE_48h DE_48h-Mafg_MA0659.4 12 bp overlap
NRL 1 dataset
Motif DE_48h DE_48h-NRL_MA0842.3 12 bp overlap
Nfat5 1 dataset
Motif DE_48h DE_48h-Nfat5_MA0606.3 8 bp overlap
Nfatc2 1 dataset
Motif DE_48h DE_48h-Nfatc2_MA0152.3 8 bp overlap
Rhox11 1 dataset
Motif DE_48h DE_48h-Rhox11_MA0629.2 9 bp overlap
SIX1 2 datasets
Motif DE_48h DE_48h-SIX1_MA1118.2 9 bp overlap
Motif DE_60h DE_60h-SIX1_MA1118.2 9 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 228 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 261 bp overlap
SREBF1 2 datasets
Motif DE_48h DE_48h-SREBF1_MA0829.3 10 bp overlap
Motif DE_60h DE_60h-SREBF1_MA0829.3 10 bp overlap
Sox6 2 datasets
Motif DE_48h DE_48h-Sox6_MA0515.1 10 bp overlap
Motif DE_60h DE_60h-Sox6_MA0515.1 10 bp overlap
Spz1 1 dataset
Motif DE_48h DE_48h-Spz1_MA0111.1 11 bp overlap
Stat4 1 dataset
Motif DE_48h DE_48h-Stat4_MA0518.2 10 bp overlap
ZIM3 1 dataset
Motif DE_48h DE_48h-ZIM3_MA1709.2 11 bp overlap
ZNF317 2 datasets
Motif DE_48h DE_48h-ZNF317_MA1593.2 8 bp overlap
Motif DE_48h DE_48h-ZNF317_MA1593.2 8 bp overlap
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