chr2 : 179,056,956 179,057,706
750 bp 11 TFs 1 linked gene
This 750 bp open chromatin element is linked to CCDC141 and is bound by 11 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CCDC141 6.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:179,051,956 – 179,062,706
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
11 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 243 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 668 bp overlap
ChIP DE DE-FOXA2-2 706 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 509 bp overlap
ChIP DE DE-GATA4-2 657 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 439 bp overlap
ChIP DE DE-GATA6-2 618 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 264 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 447 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 405 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 347 bp overlap
JUN 2 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 283 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 390 bp overlap
RAD21 3 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 161 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 115 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 167 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 347 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 116 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 513 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 462 bp overlap
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 54 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 495 bp overlap
SMARCA4 1 dataset
ChIP BT-16_Dox GSE71504.SMARCA4.BT-16_Dox 137 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 280 bp overlap
TP63 1 dataset
ChIP SUIT-2 GSE115461.TP63.SUIT-2 205 bp overlap