chr2 : 143,000,690 143,001,359
669 bp 17 TFs 0 linked genes
This 669 bp open chromatin element has no linked target genes and is bound by 17 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:142,995,690 – 143,006,359
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 170 bp overlap
CDK9 2 datasets
ChIP MM1-S_DMSO GSE42355.CDK9.MM1-S_DMSO 141 bp overlap
ChIP MM1-S_JQ1_5000NM GSE49224.CDK9.MM1-S_JQ1_5000NM 187 bp overlap
CEBPA 1 dataset
ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 135 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 183 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 65 bp overlap
EZH2 1 dataset
ChIP DND41 ENCSR000ASW.EZH2.DND41 282 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 329 bp overlap
ChIP DE DE-FOXA2-2 484 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 435 bp overlap
ChIP DE DE-GATA4-2 392 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 419 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 403 bp overlap
ChIP DE DE-GATA6-2 493 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 109 bp overlap
HNF4A 4 datasets
ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 164 bp overlap
ChIP liver ENCFF354NRH 346 bp overlap
ChIP liver ENCFF449HPV 215 bp overlap
ChIP liver ERP002306.HNF4A.liver 130 bp overlap
IRF4 2 datasets
ChIP BC-3 GSE132777.IRF4.BC-3 218 bp overlap
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 88 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCFF174WDB 391 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 279 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 526 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 540 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 463 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 337 bp overlap
TRIM28 3 datasets
ChIP HEK293 ENCFF582MWI 444 bp overlap
ChIP WIBR3 GSE84382.TRIM28.WIBR3 147 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 198 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 214 bp overlap