chr2 : 140,136,469 140,137,013
544 bp 16 TFs 0 linked genes
This 544 bp open chromatin element has no linked target genes and is bound by 16 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:140,131,469 – 140,142,013
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 192 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 164 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 211 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 356 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 461 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 333 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 507 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 372 bp overlap
JUN 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 348 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 136 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 444 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 496 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 324 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 247 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 288 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 309 bp overlap
POU5F1 3 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 404 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 428 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 308 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 394 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 200 bp overlap
SMARCC1 4 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 365 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 460 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 206 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 181 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 222 bp overlap