Linked Genes

5 genes

Gene	Dist. to TSS	Distance	Link type
PAXBP1-AS1	12.0 kb	Distal	Multiome
SYNJ1	12.2 kb	Distal	Multiome
PAXBP1	31.7 kb	Distal	Multiome
C21orf62-AS1	32.1 kb	Distal	Multiome
CFAP298	127.5 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

12 transcription factors

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 195 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 364 bp overlap

ChIP DE DE-FOXA2-2 296 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 446 bp overlap

ChIP DE DE-GATA4-2 431 bp overlap

GATA6 4 datasets

ChIP DE DE-GATA6-1 392 bp overlap

ChIP DE DE-GATA6-2 415 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 466 bp overlap

ChIP foregut_KO GSE117136.GATA6.foregut_KO 260 bp overlap

NANOG 1 dataset

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 121 bp overlap

NKX2-1 1 dataset

ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 56 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 299 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 337 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 439 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 352 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 466 bp overlap

USF1 2 datasets

ChIP H1 ENCFF090WVU 241 bp overlap

ChIP WA01 ENCSR000BIU.USF1.WA01 139 bp overlap

ZNF362 3 datasets

ChIP HEK293 ENCFF436CGE 193 bp overlap

ChIP HEK293 ENCFF436CGE 395 bp overlap

ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 143 bp overlap