chr18 : 59,705,578 59,705,939
361 bp 14 TFs 2 linked genes
This 361 bp open chromatin element is linked to CCBE1 and ENSG00000267774 and is bound by 14 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
CCBE1 8.2 kb Proximal Proximity
ENSG00000267774 9.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:59,700,578 – 59,710,939
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
14 transcription factors
Source
Cell type
ESR1 1 dataset
ChIP breast-cancer_3487 GSE126004.ESR1.breast-cancer_3487 150 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_3487 GSE126004.FOXA1.breast-cancer_3487 97 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 361 bp overlap
ChIP DE DE-FOXA2-2 361 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 361 bp overlap
ChIP DE DE-GATA4-2 361 bp overlap
ChIP foregut GSE117136.GATA4.foregut 361 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 269 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 182 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 361 bp overlap
ChIP DE DE-GATA6-2 361 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 270 bp overlap
ChIP foregut GSE117136.GATA6.foregut 361 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 195 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 213 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 361 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 171 bp overlap
SMARCA4 1 dataset
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 277 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 254 bp overlap
STAT3 1 dataset
ChIP breast-cancer_3487 GSE126004.STAT3.breast-cancer_3487 143 bp overlap
TEAD4 1 dataset
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 92 bp overlap
TP63 2 datasets
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 72 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 64 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 260 bp overlap