DE-3

DE-3.45

Submodule 10 genes

Cell junction and membrane organization factors

This module contains 10 genes including KCNQ1OT1, NUMB, CTNNA3, BTBD9, and FBXL17, with enrichment in cell junction organization and membrane-associated processes. Knockdown of HNF1B represses this module, suggesting HNF1B supports its expression during endoderm differentiation. No TFs whose knockdown activates this module were identified in the data.

Notable genes: KCNQ1OT1 NUMB CTNNA3 BTBD9 FBXL17 ZC4H2 UBA6-DT DANT2 Top TFs: HNF1B

TF Regulatory Network

Direction indicates the effect of TF knockdown on this submodule (↑ = KD upregulates; ↓ = KD downregulates).

Evidence: Direction: Max binding-only shown:
Perturbation + Binding
Perturbation only
Binding only
TF Dir NES #gRNA padj Bind OR

Enriched Terms

GO terms and pathway annotations enriched in this gene set (g:Profiler).


Module Genes (9)

All genes assigned to this co-expression submodule.

Gene Type Publications

Local co-expression graph for member genes built from Hotspot z-scores. Adjust the z-score threshold and repulsion sliders to explore the neighbourhood.

Gene Co-expression Network

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Low
High z