The protein encoded by this gene belongs to the pyridine nucleotide-disulfide oxidoreductase family, and is a member of the thioredoxin (Trx) system. Three thioredoxin reductase (TrxR) isozymes are found in mammals. TrxRs are selenocysteine-containing flavoenzymes, which reduce thioredoxins, as well as other substrates, and play a key role in redox homoeostasis. This gene encodes the third TrxR, which unlike the other two isozymes, contains an additional N-terminal glutaredoxin (Grx) domain, and shows highest expression in testis. The Grx domain allows this isozyme to participate in both Trx and glutathione systems. It functions as a homodimer containing FAD, and selenocysteine (Sec) at the active site. Sec is encoded by UGA codon that normally signals translation termination. The 3' UTRs of selenoprotein mRNAs contain a conserved stem-loop structure, the Sec insertion sequence (SECIS) element, which is necessary for the recognition of UGA as a Sec codon rather than as a stop signal. Alternatively spliced transcript variants have been found for this gene. Experimental evidence suggests the use of a non-AUG (CUG) codon as a translation initiation codon (PMID:20018845). [provided by RefSeq, Aug 2017]
Transcription factors with Perturb-seq knockdown data for TXNRD3. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = TXNRD3 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.
| TF | Mean coef | Binding | Outlier | TF→Gene link |
|---|
Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of TXNRD3, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.
| Accessibility | Element | Dist. to TSS | Link type | TFs |
|---|---|---|---|---|
| chr3:126,355,690–126,356,616 | 299.1 kb | Distal (>10kb) Multiome | 733 | |
| chr3:126,356,733–126,358,455 | 297.5 kb | Distal (>10kb) Multiome | 534 | |
| chr3:126,389,127–126,389,605 | 265.7 kb | Distal (>10kb) Multiome | 700 | |
| chr3:126,394,617–126,395,324 | 260.2 kb | Distal (>10kb) Multiome | 116 | |
| chr3:126,474,726–126,477,195 | 179.1 kb | Distal (>10kb) Multiome | 733 | |
| chr3:126,523,848–126,524,758 | 130.8 kb | Distal (>10kb) Multiome | 575 | |
| chr3:126,654,554–126,655,321 | 2 bp | At TSS Multiome | 582 | |
| chr3:126,679,144–126,679,651 | 24.3 kb | Distal (>10kb) Multiome | 342 | |
| chr3:126,703,722–126,704,881 | 49.0 kb | Distal (>10kb) Multiome | 711 | |
| chr3:126,751,552–126,752,720 | 97.3 kb | Distal (>10kb) Multiome | 361 | |
| chr3:126,887,820–126,888,945 | 233.3 kb | Distal (>10kb) Multiome | 92 | |
| chr3:126,933,925–126,934,641 | 279.3 kb | Distal (>10kb) Multiome | 84 | |
| chr3:126,982,121–126,984,731 | 329.2 kb | Distal (>10kb) Multiome HiCAR | 876 | |
| chr3:127,455,528–127,456,092 | 800.6 kb | Distal (>10kb) Multiome HiCAR | 441 | |
| chr3:127,544,147–127,544,731 | 889.3 kb | Distal (>10kb) Multiome HiCAR | 252 | |
| chr3:127,547,261–127,548,296 | 892.8 kb | Distal (>10kb) Multiome HiCAR | 460 |
Genomic view of the TXNRD3 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.